First off you should troubleshoot a little to make sure what your problem is. for example leaving your heat OFF, switch the connections for the temp sensors. If the beds sensor reads the same 200c (from the hotend readout) when pluged into the hotend temp, then perhaps you are correct something is wrong with that pin.
Another thing, is perhaps your firmware is set to the wrong type of thermistor/thermocouple for your hotend. Do you have the same type of thermistor on your heatbed and your head? If they are different you may need to change your firmware accordingly for your hotend.
If in the end you really have a bad pin or whatever, in Marlin you change your pin assignments in pins.h, (I had to change some to accomodate my reprap discount "smart LCD".) I assume sprinter is similar.
Edited 1 time(s). Last edit at 01/01/2013 01:57PM by xclusive585.